Somatic evolution of marine transmissible leukemias in the common cockle, Cerastoderma edule.

Transmissible cancers are malignant cell lineages that spread clonally between individuals. Several such cancers, termed bivalve transmissible neoplasia (BTN), induce leukemia-like disease in marine bivalves. This is the case of BTN lineages affecting the common cockle, Cerastoderma edule, which inhabits the Atlantic coasts of Europe and northwest Africa. To investigate the evolution of cockle BTN, we collected 6,854 cockles, diagnosed 390 BTN tumors, generated a reference genome and assessed genomic variation across 61 tumors. Our analyses confirmed the existence of two BTN lineages with hemocytic origins. Mitochondrial variation revealed mitochondrial capture and host co-infection events. Mutational analyses identified lineage-specific signatures, one of which likely reflects DNA alkylation. Cytogenetic and copy number analyses uncovered pervasive genomic instability, with whole-genome duplication, oncogene amplification and alkylation-repair suppression as likely drivers. Satellite DNA distributions suggested ancient clonal origins. Our study illuminates long-term cancer evolution under the sea and reveals tolerance of extreme instability in neoplastic genomes.

Distribución geográfica de la familia de caracoles terrestres Spiraxidae (Gastropoda: Pulmonata) en México / Geographic distribution of the land snail family Spiraxidae (Gastropoda: Pulmonata) in Mexico

Resumen Introducción: Spiraxidae es la familia de gasterópodos terrestres más diversa de México con una distribución principalmente neotropical. Sin embargo, la influencia de las condiciones ambientales de esta región en su distribución aún es poco conocida. Objetivo: Determinar las afinidades zoogeográficas y la influencia de factores ambientales en la distribución de Spiraxidae en México. Métodos: Compilamos registros de distribución de museos y usamos modelos para establecer áreas con composición de especies, concentración de especies, afinidades y relaciones con variables ambientales similares. Resultados: Encontramos 231 especies y subespecies, 96 en el estado de Veracruz y 74 en la Sierra Madre Oriental. La principal afinidad zoogeográfica fue neotropical. El bosque mesófilo de montaña tuvo la mayor cantidad de especies y subespecies (93). Tres de los grupos zonales tienen una composición particular de especies y el 67 % de las especies son especialistas de hábitat. La presencia de especies sigue un gradiente ambiental, con la cubierta de árboles de hoja perenne de hoja ancha y la precipitación media anual como variables determinantes. Las especies del norte tuvieron mayor tolerancia a la aridez y menor cobertura de hojas. Conclusiones: Spiraxidae tiene su mayor diversidad en los estados del Sur de México; sin embargo, la zona nororiental tiene más registros de especies. Estos caracoles se encuentran principalmente en bosques mesófilos de montaña y bosques tropicales siempre verdes. Las especies del norte de México tuvieron una mayor tolerancia a los sitios con poca lluvia y menos cobertura de árboles de hoja perenne de hoja ancha que las especies del sur.

Abstract Introduction: Spiraxidae is the most diverse family of terrestrial gastropods in Mexico with a mainly neotropical distribution. However, the influence of environmental conditions in this region on its distribution is still poorly known. Objective: To determine zoogeographic affinities and the influence of environmental factors on the distribution of Spiraxidae in Mexico. Methods: We compiled museum distribution records and used models to establish areas with similar species composition, species concentration, affinities and relationship with environmental variables. Results: We found 231 species and subspecies, 96 in Veracruz state and 74 in Sierra Madre Oriental. The main zoogeographic affinity was neotropical. Mountain mesophyll forest had the most species and subspecies (93). Three of zone groups have a particular species composition and 67 % of the species are habitat specialists. Species presence follows an environmental gradient, with broadleaf evergreen tree cover and average annual precipitation as determining variables. Northern species had greater tolerance to aridity and reduced leaf cover. Conclusions: Spiraxidae has its greatest diversity in the Southern states of Mexico; however, the Northeastern zone has more species records. These snails mostly occur in mesophyll mountain forest and tropical evergreen forest. Species from Northern Mexico had greater tolerance to sites with low rainfall and less broadleaf evergreen tree cover than Southern species.

Isolation, Molecular Identification and Antibacterial Potential of Marine Bacteria from Deep Atlantic Ocean of Morocco.

Background: Antibiotic resistance is an important concern for the public health authorities at global level. It is detrimental to human and environmental ecosystems, thus, there is a big need for natural bioactive compounds. In this work, we aimed to find out biomolecules derived from marine bacteria that may constitute an alternative to antibiotics. Methods: We isolated and identified thirty one marine bacteria collected from deep ocean water in central coast of Safi city, Morocco. Then, we induced biomolecules production in six marine bacterial strains. The extracts were tested for their antibacterial activity against gram-negative and gram-positive bacteria such as Escherichia coli ATCC 25922, Staphylococcus aureus ATCC 33592 and Listeria monocytogenes ATCC 19117. Furthermore, we partially analyzed the chemical composition of these biomolecules and evaluated their sensibility to different temperatures. Results: The six marine bacteria were able to produce molecules which inhibited the three pathogenic strains with high inhibition zones reaching 27 mm. These molecules were characterized by heat stability from 60 to 121°C relying on each strain. Conclusion: The produced molecules may offer a great potential to pharmaceutical industries as they may constitute an alternative to antibiotics that are becoming less effective due to the emergence of drugs resistance.

Microglial angiotensin type 2 receptors mediate sex-specific expression of inflammatory cytokines independently of circulating estrogen.

There are sex differences in microglia, which can maintain sex-related gene expression and functional differences in the absence of circulating sex steroids. The angiotensin type 2 (AT2) receptors mediate anti-inflammatory actions in different tissues, including brain. In mice, we performed RT-PCR analysis of microglia isolated from adult brains and RNA scope in situ hybridization from males, females, ovariectomized females, orchiectomized males and brain masculinized females. We also compared wild type and AT2 knockout mice. The expression of AT2 receptors in microglial cells showed sex differences with much higher AT2 mRNA expression in females than in males, and this was not dependent on circulating gonadal hormones, as observed using ovariectomized females, brain masculinized females and orchiectomized males. These results suggest genomic reasons, possibly related to sex chromosome complement, for sex differences in AT2 expression in microglia, as the AT2 receptor gene is located in the X chromosome. Furthermore, sex differences in expression of AT2 receptors were associated to sex differences in microglial expression of key anti-inflammatory cytokines such as interleukin-10 and pro-inflammatory cytokines such as interleukin-1ß and interleukin-6. In conclusion, sex differences in microglial AT2 receptor expression appear as a major factor contributing to sex differences in the neuroinflammatory responses beyond the effects of circulating steroids.

Mitochondrial genome sequencing of marine leukaemias reveals cancer contagion between clam species in the Seas of Southern Europe.

Clonally transmissible cancers are tumour lineages that are transmitted between individuals via the transfer of living cancer cells. In marine bivalves, leukaemia-like transmissible cancers, called hemic neoplasia (HN), have demonstrated the ability to infect individuals from different species. We performed whole-genome sequencing in eight warty venus clams that were diagnosed with HN, from two sampling points located more than 1000 nautical miles away in the Atlantic Ocean and the Mediterranean Sea Coasts of Spain. Mitochondrial genome sequencing analysis from neoplastic animals revealed the coexistence of haplotypes from two different clam species. Phylogenies estimated from mitochondrial and nuclear markers confirmed this leukaemia originated in striped venus clams and later transmitted to clams of the species warty venus, in which it survives as a contagious cancer. The analysis of mitochondrial and nuclear gene sequences supports all studied tumours belong to a single neoplastic lineage that spreads in the Seas of Southern Europe.

In humans and other animals, cancer cells divide excessively, forming tumours or flooding the blood, but they rarely spread to other individuals. However, some animals, including dogs, Tasmanian devils and bivalve molluscs like clams, cockles and mussels, can develop cancers that are transmitted from one individual to another. Despite these cancers being contagious, each one originates in a single animal, meaning that even when the cancer has spread to many individuals, its origins can be traced through its DNA. Cancer contagion is rare, but transmissible cancers seem to be particularly common in the oceans. In fact, 7 types of contagious cancer have been described in bivalve species so far. These cancers are known as 'hemic neoplasias', and are characterized by the uncontrolled division of blood-like cells, which can be released by the host they developed in, and survive in ocean water. When these cells encounter individuals from the same species, they can infect them, causing them to develop hemic neoplasia too There are still many unanswered questions about contagious cancers in bivalves. For example, how many species do the cancers affect, and which species do the cancers originate in? To address these questions, Garcia-Souto, Bruzos, Díaz et al. gathered over 400 specimens of a species of clam called the warty venus clam from the coastlines of Europe and examined them for signs of cancer. Clams collected in two regions of Spain showed signs of hemic neoplasia: one of the populations was from the Balearic Islands in the Mediterranean Sea, while the other came from the Atlantic coast of northwestern Spain. Analyzing the genomes of the tumours from each population showed that the cancer cells from both regions had likely originated in the same animal, indicating that the cancer is contagious and had spread through different populations. The analysis also revealed that the cancer did not originally develop in warty venus clams: the cancer cells contained DNA from both warty venus clams and another species called striped venus clams. These two species live close together in the Mediterranean Sea, suggesting that the cancer started in a striped venus clam and then spread to a warty venus clam. To determine whether the cancer still affected both species, Garcia-Souto, Bruzos, Díaz et al. screened 200 striped venus clams from the same areas, but no signs of cancer were found in these clams. This suggests that currently the cancer only affects the warty venus clam. These findings confirm that contagious cancers can jump between clam species, which could be threat to the marine environment. The fact that the cancer was so similar in clams from the Atlantic coast and from the Mediterranean Sea, however, suggests that it may have emerged very recently, or that human activity helped it to spread from one place to another. If the latter is the case, it may be possible to prevent further spread of these sea-borne cancers through human intervention.

Medical outcomes study social support survey (MOS-SSS) in patients with chronic disease: A psychometric assessment.

Purpose: Currently, information on the psychometric properties of the Medical outcomes study-social support survey (MOS-SSS) for patients with chronic disease in primary health care, suggests problems in the dimensionality, specifically predominant unidimensionality in a multidimensional measure. The aim of this study was to determine the internal structure (dimensionality, measurement invariance and reliability) and association with other variables. Methods: A total of 470 patients with chronic disease from a Family Medicine Unit at the Instituto Mexicano del Seguro Social, IMSS, with a mean age of 51.51 years were included. Participants responded to the Questionnaire of Sociodemographic Variables (Q-SV), SF-36 Health-Related Quality of Life Scale-version 1.1, and MOS-SSS. Results: Non-parametric (Mokken scaling analysis) and parametric (confirmatory factor analysis) analyses indicated unidimensionality, and three-factor model was not representative. A new 8-item version (MOS-S) was developed, where measurement invariance, equivalence with the long version, reliability, and relationship with the SF-36 were satisfactory. Conclusion: The MOS-SSS scale is unidimensional, and the shortened version yields valid and reliable scores for measuring social support in patients with chronic disease at the primary health care.

Aberrant integration of Hepatitis B virus DNA promotes major restructuring of human hepatocellular carcinoma genome architecture.

Most cancers are characterized by the somatic acquisition of genomic rearrangements during tumour evolution that eventually drive the oncogenesis. Here, using multiplatform sequencing technologies, we identify and characterize a remarkable mutational mechanism in human hepatocellular carcinoma caused by Hepatitis B virus, by which DNA molecules from the virus are inserted into the tumour genome causing dramatic changes in its configuration, including non-homologous chromosomal fusions, dicentric chromosomes and megabase-size telomeric deletions. This aberrant mutational mechanism, present in at least 8% of all HCC tumours, can provide the driver rearrangements that a cancer clone requires to survive and grow, including loss of relevant tumour suppressor genes. Most of these events are clonal and occur early during liver cancer evolution. Real-time timing estimation reveals some HBV-mediated rearrangements occur as early as two decades before cancer diagnosis. Overall, these data underscore the importance of characterising liver cancer genomes for patterns of HBV integration.

Isolation and Identification of Dominant Bacteria from Raw Donkey Milk Produced in a Region of Morocco by QIIME 2 and Evaluation of Their Antibacterial Activity.

Recently, the interest in donkey milk has increased considerably because it proved high nutritive and functional values of their ingredients. Its chemical composition is widely studied, but its microbiota, especially lactic acid bacteria, remains less studied. This study focuses on analyzing, isolating, and identifying lactic acid bacteria and evaluating their capacity to produce biomolecules with antibacterial activity. Among 44 strains identified, 43 are Gram-positive, and most are catalase-negative and cocci-shaped. Five strains were selected to evaluate their antibacterial activity against Listeria monocytogenes, Staphylococcus aureus, and Escherichia coli. Different induction methods allowed to amplify the antibacterial effects against these pathogenic strains.

Phylogeography of the insular populations of common octopus, Octopus vulgaris Cuvier, 1797, in the Atlantic Macaronesia.

Exploited, understudied populations of the common octopus, Octopus vulgaris Cuvier, 1797, occur in the northeastern Atlantic (NEA) throughout Macaronesia, comprising the Azores, Madeira and Canaries, and also the Cabo Verde archipelago. This octopus species, found from the intertidal to shallow continental-shelf waters, is largely sedentary, and the subject of intense, frequently unregulated fishing effort. We infer connectivity among insular populations of this octopus. Mitochondrial control region and COX1 sequence datasets reveal two highly divergent haplogroups (α and ß) at similar frequencies, with opposing clinal distributions along the sampled latitudinal range. Haplogroups have different demographic and phylogeographic patterns, with origins related to the two last glacial maxima. FST values suggest a significant differentiation for most pairwise comparisons, including insular and continental samples, from the Galicia and Morocco coasts, with the exception of pairwise comparisons for samples from Madeira and the Canaries populations. Results indicate the existence of genetically differentiated octopus populations throughout the NEA. This emphasizes the importance of regulations by autonomous regional governments of the Azores, Madeira and the Canaries, for appropriate management of insular octopus stocks.

Pan-cancer analysis of whole genomes identifies driver rearrangements promoted by LINE-1 retrotransposition.

About half of all cancers have somatic integrations of retrotransposons. Here, to characterize their role in oncogenesis, we analyzed the patterns and mechanisms of somatic retrotransposition in 2,954 cancer genomes from 38 histological cancer subtypes within the framework of the Pan-Cancer Analysis of Whole Genomes (PCAWG) project. We identified 19,166 somatically acquired retrotransposition events, which affected 35% of samples and spanned a range of event types. Long interspersed nuclear element (LINE-1; L1 hereafter) insertions emerged as the first most frequent type of somatic structural variation in esophageal adenocarcinoma, and the second most frequent in head-and-neck and colorectal cancers. Aberrant L1 integrations can delete megabase-scale regions of a chromosome, which sometimes leads to the removal of tumor-suppressor genes, and can induce complex translocations and large-scale duplications. Somatic retrotranspositions can also initiate breakage-fusion-bridge cycles, leading to high-level amplification of oncogenes. These observations illuminate a relevant role of L1 retrotransposition in remodeling the cancer genome, with potential implications for the development of human tumors.

Modelización de la captura y fases de desarrollo de la pesquería de la jaiba azul (Callinectes sapidus) en la Laguna Madre, Tamaulipas, México / Modelling the catch and development phases of the blue crab fishery (Callinectes sapidus) in the Laguna Madre, Tamaulipas, México

RESUMEN La captura promedio anual de la pesquería de la jaiba azul (Callinectes sapidus) (JA) en Tamaulipas, México se estima en 2 733 T, de la cual, el 82 % se pesca en la Laguna Madre, sitio que se considera aprovechado al máximo de su capacidad. El objetivo de la presente investigación fue modelar la captura anual de la JA en la Laguna Madre, Tamaulipas, mediante el ajuste de funciones matemáticas de tipo lineal y no lineal (o curvilínea), a la serie de tiempo de 1998 a 2012, además de identificar las fases de desarrollo de la pesquería, de acuerdo a varios modelos generalizados. Se utilizó el enfoque de la teoría de la información y el procedimiento de la inferencia multimodelo (IMM). Se ajustaron 11 modelos de regresión lineal y no lineal. Para la selección de modelos se utilizaron los criterios de información Akaike corregido (CIAc) y bayesiano (CIB). Para el IMM se consideró el nivel ∆i <2de plausibilidad de CIAc y CIB. Los modelos elegidos para el IMM fueron compuesto, crecimiento, exponencial, logístico, potencial y el sigmoideo, considerándose como más adecuados los primeros cuatro modelos citados. Los modelos promedio del IMM presentaron valores de β 0 y β 1 de 0.939 y 0.377 respectivamente, según CIAc; y de 0.952 y 0.344 respectivamente, de acuerdo al CIB. Solo los modelos compuesto y logístico mostraron significancia estadística en sus dos parámetros de regresión (β 0 y β 1). El índice de sustentabilidad pesquera reveló seis periodos de la captura y una disminución en magnitud de los cambios de la captura. La serie de datos analizada incluye dos ciclos de vida de acuerdo a los modelos de Csirke y Caddy. Los resultados mostraron que al final del periodo estudiado la pesquería se encontraba en colapso y decadencia.

ABSTRACT The average annual catch of the blue crab (Callinectes sapidus) (BC) fishery in Tamaulipas, Mexico is estimated at 2 733 T, of which the 82 % is caught in the Laguna Madre, which is considered to be exploited to the maximum of its capacity. The objective of the present investigation was to model the annual catch of the BC in the Laguna Madre, Tamaulipas, by adjusting mathematical functions of the linear and nonlinear (or curvilinear) type, to the time series from 1998 to 2012. In addition, the phases of development of the fishery, according to several generalized models, were identified. We used the information theory approach and multimodel inference procedure (MMI). Eleven linear and nonlinear regression models were fitted. For the selection of models, the corrected Akaike corrected (AICc) and Ba-yesian (BIC) information criteria were used. For the MMI, the level ∆i < 2 of plausibility of AICc and BIC was considered. The models chosen for the MMI were compound, growth, exponential, logistic, potential and the sigmoid, with the first four models being considered the most suitable of all those cited. The average models of the MMI presented values of β 0 and β 1: 0.939 and 0.377 respectively, according to CIAc; and 0.952 and 0.344 respectively, according to the CIB. Only the composite and logistic models showed statistical significance in their two regression parameters (β 0 and β 1). The fishery sustainability index revealed six catch periods and a decrease in magnitude of catch changes. The data series analyzed includes two life cycles according to the Csirke and Caddy models. The results showed that at the end of the studied period the fishery was in collapse and decay.

Evaluación del crecimiento de Callinectes sapidus (Decapoda: Portunidae) con métodos basados en talla, Tamaulipas, México / Evaluation of the growth of Callinectes sapidus (Decapoda: Portunidae) by the use of lengthbased methods based on size in Tamaulipas, Mexico

ResumenLa captura de la jaiba azul (Callinectes sapidus) es una de las principales del Estado de Tamaulipas, México, tanto por su volumen y precio de venta, como por la generación de empleo, pero se cuenta con escasa información de sus características biológicas. El objetivo del presente estudio fue evaluar los parámetros de crecimiento de la jaiba azul, estableciendo el método más adecuado para realizarlo. Se estimó la frecuencia de tallas de 17 814 jaibas de muestreos realizados de enero a junio 2009, provenientes de la captura comercial de trece localidades, comprendidas en cuatro lagunas costeras: Laguna El Barril, Laguna Madre, Laguna de Morales y Laguna de San Andrés. Los parámetros de crecimiento se estimaron usando los métodos indirectos ELEFAN, PROJMAT y SLCA en combinación con la técnica jackknife para establecer la incertidumbre de las estimaciones inherentes a cada método. Los parámetros de crecimiento L∞ y k se unificaron para efectos comparativos mediante el índice de crecimiento phi prima (Φ’). Con una moda de 110 mm, el intervalo de longitud de caparazón varió entre 60 y 205 mm. Los valores de los parámetros de crecimiento variaron de acuerdo al método utilizado. Utilizando SLCA, L∞ varió entre 259 y 260 mm y k osciló entre 0.749 y 0.750/año; con PROJMAT, L∞ registró valores entre 205 y 260 mm y k fluctuó entre 0.550 y 0.740/año, y con ELEFAN, L∞ osciló entre 156 y 215 mm y k varió entre 0.479 y 0.848/año. Las estimaciones mediante jackknife detectaron nula variabilidad en Φ’ entre localidades y diferencias significativas entre métodos. Los rangos de valores de Φ’ estimados por SLCA y PROJMAT (4.70 a 4.71 y 4.66 a 4.70, respectivamente) se ubicaron en el rango reportado por la literatura (4.201-4.798), mientras que ELEFAN aportó valores significativamente menores (3.87 a 4.27). Los métodos SLCA y PROJMAT en combinación con la técnica jackknife, resultaron ser los más adecuados para estimar los parámetros de crecimiento de C. sapidus.

AbstractThe capture blue crab (Callinectes sapidus) is one of the major fisheries of the state of Tamaulipas, Mexico; both in volume and selling price, as well as employment generation, but there is little information on its biological characteristics. The aim of this study was to evaluate the growth parameters of the blue crab, establishing the most appropriate method. We estimated the length frequency of 17 814 crabs from commercial catch of thirteen locations, including four coastal lagoons. The lagoons were El Barril, Madre, Morales and San Andrés from Tamaulipas, State. Growth parameters were evaluated using indirect methods ELEFAN, PROJMAT and SLCA in combination with the jackknife technique to establish the uncertainty of estimates inherent in each method. The growth parameters L∞ and k were consolidated for purposes of comparison with the growth index phi prime (Φ’). With a mode of 110 mm, the interval carapace length varied between 60 and 205 mm. The values of the growth parameters varied according to the method used. Using SLCA, L∞ varied between 259 and 260 mm and k ranged between 0.749 and 0.750 /year; with PROJMAT, L∞ recorded values between 205 and 260 mm, k fluctuated between 0.550 and 0.740/year, and with ELEFAN, L∞ ranged between 156 and 215 mm and k varied between 0.479 and 0.848/year. Estimates by jackknife detected no variability in Φ’ between locations and significant differences between methods. The ranges of values of Φ’ and PROJMAT estimated SLCA (4.70 to 4.71 and 4.66 to 4.70, respectively) were in the range reported in the literature (4.201-4.798), while lower values ELEFAN contributed significantly (3.87 to 4.27). The SLCA and PROJMAT methods in combination with the jackknife technique, proved to be the most suitable to estimate the growth parameters of C. sapidus. Rev. Biol. Trop. 64 (2): 821-836. Epub 2016 June 01.

[Evaluation of the growth of Callinectes sapidus (Decapoda: Portunidae) by the use of lengthbased methods based on size in Tamaulipas, Mexico]. / Evaluación del crecimiento de Callinectes sapidus (Decapoda: Portunidae) con métodos basados en talla, Tamaulipas, México.

The capture blue crab (Callinectes sapidus) is one of the major fisheries of the state of Tamaulipas, Mexico; both in volume and selling price, as well as employment generation, but there is little information on its biological characteristics. The aim of this study was to evaluate the growth parameters of the blue crab, establishing the most appropriate method. We estimated the length frequency of 17 814 crabs from commercial catch of thirteen locations, including four coastal lagoons. The lagoons were El Barril, Madre, Morales and San Andrés from Tamaulipas, State. Growth parameters were evaluated using indirect methods ELEFAN, PROJMAT and SLCA in combination with the jackknife technique to establish the uncertainty of estimates inherent in each method. The growth parameters L∞ and k were consolidated for purposes of comparison with the growth index phi prime (Φ'). With a mode of 110 mm, the interval carapace length varied between 60 and 205 mm. The values of the growth parameters varied according to the method used. Using SLCA, L∞ varied between 259 and 260 mm and k ranged between 0.749 and 0.750 /year; with PROJMAT, L∞ recorded values between 205 and 260 mm, k fluctuated between 0.550 and 0.740/year, and with ELEFAN, L∞ ranged between 156 and 215 mm and k varied between 0.479 and 0.848/year. Estimates by jackknife detected no variability in Φ' between locations and significant differences between methods. The ranges of values of Φ' and PROJMAT estimated SLCA (4.70 to 4.71 and 4.66 to 4.70, respectively) were in the range reported in the literature (4.201-4.798), while lower values ELEFAN contributed significantly (3.87 to 4.27). The SLCA and PROJMAT methods in combination with the jackknife technique, proved to be the most suitable to estimate the growth parameters of C. sapidus.

Cloning and heterologous overexpression of three gap genes encoding different glyceraldehyde-3-phosphate dehydrogenases from the plant pathogenic bacterium Pseudomonas syringae pv. tomato strain DC3000.

The gammaproteobacterium Pseudomonas syringae pv. tomato DC3000 is the causal agent of bacterial speck, a common disease of tomato. The mode of infection of this pathogen is not well understood, but according to molecular biological, genomic and proteomic data it produces a number of proteins that may promote infection and draw nutrients from the plant. Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) is a major enzyme of carbon metabolism that was reported to be a surface antigen and virulence factor in other pathogenic microorganisms, but its possible role in the infection process of P. syringae has so far not been studied. Whole-genome sequence analyses revealed the occurrence in this phytopathogenic bacterium of three paralogous gap genes encoding distinct GAPDHs, namely two class I enzymes having different molecular mass subunits and one class III bifunctional D-erythrose-4-phosphate dehydrogenase/GAPDH enzyme. By using genome bioinformatics data, as well as alignments of both DNA and deduced protein sequences, the three gap genes of P. syringae were one-step cloned with a His-Tag in pET21a vector using a PCR-based strategy, and its expression optimized in Escherichia coli BL21 to achieve high yield of the heterologous proteins. In accordance with their distinct molecular phylogenies, these bacterial gap genes encode functional GAPDHs of diverse molecular masses and nicotinamide-coenzyme specificities, suggesting specific metabolic and/or cellular roles.